Changelog

All notable changes to Binx are documented here.

[0.1.0] - 2025-12-12

Added

• Initial release
• binx gwas - GWASpoly-style GWAS with multiple genetic models
• binx kinship - VanRaden kinship matrix computation
• binx dosage - Genotype dosage estimation
• binx convert - VCF to Binx format conversion
• binx plot - Manhattan and QQ plot generation
• binx qtl - QTL extraction from GWAS results
• binx threshold - Significance threshold calculation

Validated

• rrblup-rs validated against R/rrBLUP (52 test cases, 5-6 decimal accuracy)
• gwaspoly-rs validated against R/GWASpoly (4-5 decimal accuracy)

Version Format

Binx follows Semantic Versioning:

• MAJOR: Incompatible API/format changes
• MINOR: New features (backward compatible)
• PATCH: Bug fixes (backward compatible)